Northeastern University

2007

View With Abstracts

1. Echebarria, B. and A. Karma (2007). "Amplitude equation approach to spatiotemporal dynamics of cardiac alternans." Physical Review E 76(5): 051911.

2. Gruia, F., X. Ye, D. Ionascu, M. Kubo and P. M. Champion (2007). "Low frequency spectral density of ferrous heme: Perturbations induced by axial Ligation and protein insertion." Biophysical Journal 93(12): 4404-4413.

3. Iwatani, Y., D. S. B. Chan, F. Wang, K. S. Maynard, W. Sugiura, A. M. Gronenborn, I. Rouzina, M. C. Williams, K. Musier-Forsyth and J. G. Levin (2007). "Deaminase-independent inhibition of HIV-1 reverse transcription by APOBEC3G." Nucleic Acids Research 35(21): 7096-7108.

4. Karma, A. and R. F. Gilmour (2007). "Nonlinear dynamics of heart rhythm disorders." Physics Today 60(3): 51-57.

5. Leu, B. M., N. J. Silvernail, M. Z. Zgierski, G. R. A. Wyllie, M. K. Ellison, W. R. Scheidt, J. Y. Zhao, W. Sturhahn, E. E. Alp and J. T. Sage (2007). "Quantitative vibrational dynamics of iron in carbonyl porphyrins." Biophysical Journal 92(11): 3764-3783.

6. McCauley, M. J. and M. C. Williams (2007). "Mechanisms of DNA binding determined in optical tweezers experiments." Biopolymers 85(2): 154-168.

7. McCauley, M. J., J. Zimmerman, L. J. Maher and M. C. Williams (2007). "HMGB binding to DNA: Single and double box motifs." Journal of Molecular Biology 374(4): 993-1004.

8. Pons, A. J., A. Karma, S. Akamatsu, M. Newey, A. Pomerance, H. Singer and W. Losert (2007). "Feedback control of unstable cellular solidification fronts." Physical Review E 75(2): 021602

9. Sato, D., Y. Shiferaw, Z. L. Qu, A. Garfinkel, J. N. Weiss and A. Karma (2007). "Inferring the cellular origin of voltage and calcium alternans from the spatial scales of phase reversal during discordant alternans." Biophysical Journal 92(4): L33-L35.

10. Silvernail, N. J., A. Barabanschikov, J. W. Pavlik, B. C. Noll, J. Y. Zhao, E. E. Alp, W. Sturhahn, J. T. Sage and W. R. Scheidt (2007). "Interplay of structure and vibrational dynamics in six-coordinate heme nitrosyls." Journal of the American Chemical Society 129(8): 2200

11. Sokoloff, J. B. (2007). "Theory of friction between neutral polymer brushes." Macromolecules 40(11): 4053-4058.

12. Vladescu, I. D., M. J. McCauley, M. E. Nunez, I. Rouzina and M. C. Williams (2007). "Quantifying force-dependent and zero-force DNA intercalation by single-molecule stretching." Nature Methods 4(6): 517-522.

13. Williams, M. C. (2007). "Stuffing a virus with DNA: Dissecting viral genome packaging." Proceedings of the National Academy of Sciences of the United States of America 104(27): 11125-11126.

14. Wu, K. A. and A. Karma (2007). "Phase-field crystal modeling of equilibrium bcc-liquid interfaces." Physical Review B 76(18): 184107.

15. Ye, X., D. Ionascu, F. Gruia, A. Yu, A. Benabbas and P. M. Champion (2007). "Temperature-dependent heme kinetics with nonexponential binding and barrier relaxation in the absence of protein conformational substates." Proceedings of the National Academy of Sciences of the United States of America 104(37): 14682-14687.